<?xml version="1.0" encoding="utf-8" standalone="yes"?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom"><channel><title>Chapters on Bioinformatics with AI</title><link>https://carywoods.github.io/biobook2/docs/</link><description>Recent content in Chapters on Bioinformatics with AI</description><generator>Hugo</generator><language>en-us</language><atom:link href="https://carywoods.github.io/biobook2/docs/index.xml" rel="self" type="application/rss+xml"/><item><title>Downloads</title><link>https://carywoods.github.io/biobook2/docs/downloads/</link><pubDate>Mon, 01 Jan 0001 00:00:00 +0000</pubDate><guid>https://carywoods.github.io/biobook2/docs/downloads/</guid><description>&lt;h1 id="downloads"&gt;Downloads&lt;a class="anchor" href="#downloads"&gt;#&lt;/a&gt;&lt;/h1&gt;
&lt;p&gt;Every script from the book, ready to run. Choose &lt;code&gt;.zip&lt;/code&gt; or &lt;code&gt;.tar.gz&lt;/code&gt; — the
contents are identical.&lt;/p&gt;
&lt;h2 id="all-scripts"&gt;All scripts&lt;a class="anchor" href="#all-scripts"&gt;#&lt;/a&gt;&lt;/h2&gt;
&lt;p&gt;Python and Perl together, with the setup README.&lt;/p&gt;
&lt;table&gt;
 &lt;thead&gt;
 &lt;tr&gt;
 &lt;th&gt;Format&lt;/th&gt;
 &lt;th&gt;Size&lt;/th&gt;
 &lt;th&gt;Link&lt;/th&gt;
 &lt;/tr&gt;
 &lt;/thead&gt;
 &lt;tbody&gt;
 &lt;tr&gt;
 &lt;td&gt;ZIP&lt;/td&gt;
 &lt;td&gt;133 KB&lt;/td&gt;
 &lt;td&gt;&lt;a href="../../downloads/biobook-all-scripts.zip"&gt;biobook-all-scripts.zip&lt;/a&gt;&lt;/td&gt;
 &lt;/tr&gt;
 &lt;tr&gt;
 &lt;td&gt;TAR.GZ&lt;/td&gt;
 &lt;td&gt;68 KB&lt;/td&gt;
 &lt;td&gt;&lt;a href="../../downloads/biobook-all-scripts.tar.gz"&gt;biobook-all-scripts.tar.gz&lt;/a&gt;&lt;/td&gt;
 &lt;/tr&gt;
 &lt;/tbody&gt;
&lt;/table&gt;
&lt;div class="highlight"&gt;&lt;pre tabindex="0" class="chroma"&gt;&lt;code class="language-bash" data-lang="bash"&gt;&lt;span class="line"&gt;&lt;span class="cl"&gt;unzip biobook-all-scripts.zip
&lt;/span&gt;&lt;/span&gt;&lt;span class="line"&gt;&lt;span class="cl"&gt;&lt;span class="c1"&gt;# or&lt;/span&gt;
&lt;/span&gt;&lt;/span&gt;&lt;span class="line"&gt;&lt;span class="cl"&gt;tar -xzf biobook-all-scripts.tar.gz&lt;/span&gt;&lt;/span&gt;&lt;/code&gt;&lt;/pre&gt;&lt;/div&gt;&lt;h2 id="python-only"&gt;Python only&lt;a class="anchor" href="#python-only"&gt;#&lt;/a&gt;&lt;/h2&gt;
&lt;p&gt;39 vanilla + 39 AI scripts (78 total).&lt;/p&gt;
&lt;table&gt;
 &lt;thead&gt;
 &lt;tr&gt;
 &lt;th&gt;Format&lt;/th&gt;
 &lt;th&gt;Size&lt;/th&gt;
 &lt;th&gt;Link&lt;/th&gt;
 &lt;/tr&gt;
 &lt;/thead&gt;
 &lt;tbody&gt;
 &lt;tr&gt;
 &lt;td&gt;ZIP&lt;/td&gt;
 &lt;td&gt;93 KB&lt;/td&gt;
 &lt;td&gt;&lt;a href="../../downloads/biobook-python-scripts.zip"&gt;biobook-python-scripts.zip&lt;/a&gt;&lt;/td&gt;
 &lt;/tr&gt;
 &lt;tr&gt;
 &lt;td&gt;TAR.GZ&lt;/td&gt;
 &lt;td&gt;47 KB&lt;/td&gt;
 &lt;td&gt;&lt;a href="../../downloads/biobook-python-scripts.tar.gz"&gt;biobook-python-scripts.tar.gz&lt;/a&gt;&lt;/td&gt;
 &lt;/tr&gt;
 &lt;/tbody&gt;
&lt;/table&gt;
&lt;h2 id="perl-only"&gt;Perl only&lt;a class="anchor" href="#perl-only"&gt;#&lt;/a&gt;&lt;/h2&gt;
&lt;p&gt;49 companion scripts plus the &lt;code&gt;BeginPerlBioinfo.pm&lt;/code&gt; module.&lt;/p&gt;</description></item></channel></rss>